7TN8
Crystal structure of Zea mays Inositol-tetrakisphosphate Kinase 1 mutant (ZmITPK1-H192A) in complex with InsP6
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-12-03 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.0 |
Spacegroup name | P 61 2 2 |
Unit cell lengths | 99.070, 99.070, 215.444 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 42.110 - 2.600 |
R-factor | 0.2047 |
Rwork | 0.202 |
R-free | 0.25170 |
Structure solution method | SAD |
RMSD bond length | 0.011 |
RMSD bond angle | 1.928 |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.640 |
High resolution limit [Å] | 2.600 | 7.050 | 2.600 |
Rmerge | 0.066 | 0.067 | 0.849 |
Rmeas | 0.070 | 0.072 | 0.891 |
Rpim | 0.023 | 0.025 | 0.269 |
Total number of observations | 199201 | ||
Number of reflections | 20094 | 1149 | 974 |
<I/σ(I)> | 15.5 | ||
Completeness [%] | 99.7 | 97.5 | 99.8 |
Redundancy | 9.9 | 8.4 | 10.6 |
CC(1/2) | 0.982 | 0.881 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 293 | 12% PEG3350, 100 mM HEPES, 7.0, 200 mM calcium chloride, 10% glycerol |