7TN5
Crystal structure of Zea mays Inositol-tetrakisphosphate Kinase 1 (ITPK1)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 22-BM |
| Synchrotron site | APS |
| Beamline | 22-BM |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2019-12-14 |
| Detector | MARMOSAIC 225 mm CCD |
| Wavelength(s) | 1.0 |
| Spacegroup name | P 61 2 2 |
| Unit cell lengths | 98.883, 98.883, 215.915 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 49.490 - 2.900 |
| R-factor | 0.1797 |
| Rwork | 0.177 |
| R-free | 0.22660 |
| Structure solution method | SAD |
| RMSD bond length | 0.010 |
| RMSD bond angle | 1.794 |
| Data scaling software | SCALEPACK |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 2.950 |
| High resolution limit [Å] | 2.900 | 7.860 | 2.900 |
| Rmerge | 0.068 | 0.022 | 0.873 |
| Rmeas | 0.071 | 0.023 | 0.907 |
| Rpim | 0.019 | 0.007 | 0.245 |
| Total number of observations | 188525 | ||
| Number of reflections | 14458 | 827 | 700 |
| <I/σ(I)> | 12.7 | ||
| Completeness [%] | 98.4 | 94.7 | 99.6 |
| Redundancy | 13 | 11.4 | 13 |
| CC(1/2) | 0.998 | 0.931 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 8 | 293 | 1 M potassium sodium tartrate, 100 mM imidazole, pH 8.0, 200 mM sodium chloride |






