7TLM
Structure of Atopobium parvulum SufS
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2019-05-05 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.54 |
Spacegroup name | P 61 2 2 |
Unit cell lengths | 92.011, 92.011, 178.242 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 29.710 - 1.800 |
R-factor | 0.1961 |
Rwork | 0.195 |
R-free | 0.22520 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5j8q |
RMSD bond length | 0.008 |
RMSD bond angle | 0.905 |
Data reduction software | d*TREK |
Data scaling software | d*TREK (9.9.9.11W9R) |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.710 | 29.710 | 1.860 |
High resolution limit [Å] | 1.800 | 3.880 | 1.800 |
Rmerge | 0.061 | 0.046 | 0.291 |
Rmeas | 0.062 | 0.047 | 0.313 |
Total number of observations | 740239 | 87716 | 27038 |
Number of reflections | 41844 | 4534 | 3898 |
<I/σ(I)> | 23.9 | 50.1 | 5.1 |
Completeness [%] | 99.4 | 100 | 94.6 |
Redundancy | 17.56 | 19.19 | 6.93 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 294 | 10% glycerol, 20% PEG300, 10% PEG8000 |