7TIZ
Crystal structure of SARS-CoV-2 3CL in complex with inhibitor NK01-63
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-02-07 |
Detector | DECTRIS EIGER2 X 16M |
Wavelength(s) | 0.979 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 97.433, 81.640, 51.831 |
Unit cell angles | 90.00, 114.50, 90.00 |
Refinement procedure
Resolution | 47.170 - 1.550 |
R-factor | 0.1724 |
Rwork | 0.170 |
R-free | 0.19060 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7jsu |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.170 | 1.510 |
High resolution limit [Å] | 1.490 | 1.490 |
Rmerge | 0.056 | 1.682 |
Number of reflections | 59352 | 2628 |
<I/σ(I)> | 16.7 | 1.1 |
Completeness [%] | 97.8 | 87.7 |
Redundancy | 6.8 | 6.1 |
CC(1/2) | 0.999 | 0.574 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICROBATCH | 5 | 277 | 0.1 M potassium thiocyanate, 0.1 M sodium acetate, pH 5, and 20% (w/v) PEG 8000 |