7TIF
2.85 Angstroem crystal structure of Arginyltransferase 1 (ATE1) from Saccharomyces cerevisiae
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2020-10-06 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 0.97872 |
Spacegroup name | P 43 |
Unit cell lengths | 235.270, 235.270, 171.100 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 65.250 - 2.850 |
R-factor | 0.2027 |
Rwork | 0.200 |
R-free | 0.25710 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | AlphaFold |
RMSD bond length | 0.010 |
RMSD bond angle | 1.233 |
Data reduction software | xia2 |
Data scaling software | xia2 |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 68.230 | 2.952 |
High resolution limit [Å] | 2.850 | 2.850 |
Number of reflections | 216864 | 21570 |
<I/σ(I)> | 11.1 | |
Completeness [%] | 100.0 | |
Redundancy | 7.7 | |
CC(1/2) | 0.997 | 0.330 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 2.0 M ammonium sulfate, 2.5 % isopropanol, 1 mM dithiotreitol |