Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7TGD

[T:Ag+/Hg2+:T--(pH8.5-pH11; 300s in metals)] Metal-mediated DNA base pair in tensegrity triangle grown at pH 8.5 and soaked in pH 11 with Ag+ and Hg2+ for 300s

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 17-ID
Synchrotron siteAPS
Beamline17-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2021-11-14
DetectorDECTRIS EIGER2 X 9M
Wavelength(s)1.00743
Spacegroup nameH 3
Unit cell lengths106.687, 106.687, 88.049
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution63.740 - 5.250
R-factor0.232
Rwork0.228
R-free0.26990
Structure solution methodSAD
RMSD bond length0.010
RMSD bond angle1.162
Data reduction softwareautoPROC
Data scaling softwareSTARANISO
Phasing softwareAutoSol
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]63.7406.110
High resolution limit [Å]5.2505.250
Number of reflections2016404
<I/σ(I)>7.6
Completeness [%]86.1
Redundancy10.5
CC(1/2)0.9940.365
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.5293Tris, magnesium sulfate, silver nitrate, mercury chloride

226262

PDB entries from 2024-10-16

PDB statisticsPDBj update infoContact PDBjnumon