7TDQ
Crystal structure of KSHV KicGAS/ORF52
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | NSLS-II BEAMLINE 17-ID-1 |
| Synchrotron site | NSLS-II |
| Beamline | 17-ID-1 |
| Temperature [K] | 80 |
| Detector technology | PIXEL |
| Collection date | 2020-07-31 |
| Detector | DECTRIS EIGER X 9M |
| Wavelength(s) | 0.9795 |
| Spacegroup name | I 2 2 2 |
| Unit cell lengths | 53.332, 58.683, 138.421 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 49.770 - 2.500 |
| R-factor | 0.2286 |
| Rwork | 0.225 |
| R-free | 0.26500 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 2oa5 |
| RMSD bond length | 0.002 |
| RMSD bond angle | 0.505 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | PHENIX |
| Refinement software | PHENIX (1.15.2_3472) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 50.000 | 2.490 |
| High resolution limit [Å] | 2.400 | 2.400 |
| Rmerge | 0.128 | 0.595 |
| Rmeas | 0.142 | 0.696 |
| Rpim | 0.062 | 0.351 |
| Number of reflections | 15886 | 1481 |
| <I/σ(I)> | 19.78 | 1.32 |
| Completeness [%] | 98.3 | 90.4 |
| Redundancy | 4.9 | 2.9 |
| CC(1/2) | 0.991 | 0.751 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 289 | 1 microL of protein (10 mg/ml) + 1 microL of reservoir solution of 9% (v/v) PEG3350, 100mM Na-citrate pH 4.5 + 0.2microL of the detergent additive n-Octyl-N,N-dimethyl-3-ammonio-1-propanesulfonate |






