7TA9
Crystal Structure of thymidylate synthase from Acinetobacter baumannii
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.1 |
Synchrotron site | ALS |
Beamline | 5.0.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-05-09 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97740 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 64.940, 73.760, 109.380 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.520 - 1.500 |
R-factor | 0.1631 |
Rwork | 0.162 |
R-free | 0.19120 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3ix6 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MoRDa |
Refinement software | PHENIX (v4438) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 44.520 | 44.520 | 1.540 |
High resolution limit [Å] | 1.500 | 6.710 | 1.500 |
Rmerge | 0.035 | 0.016 | 0.560 |
Rmeas | 0.038 | 0.017 | 0.609 |
Total number of observations | 700365 | ||
Number of reflections | 83501 | 1063 | 5496 |
<I/σ(I)> | 38.92 | 99.54 | 3.91 |
Completeness [%] | 98.6 | 99.3 | 88.9 |
Redundancy | 8.388 | 7.859 | 5.692 |
CC(1/2) | 1.000 | 1.000 | 0.884 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5 | 290 | Protein at 34 mg/mL was mixed 1:1 (0.4 uL protein and 0.4 uL precipitant) with 10% w/v PEG 20,000, 20% v/v PEG MME 550, 0.03 M each diethyleneglycol, triethyleneglycol, tetraethyleneglycol, and pentaethyleneglycol, and 0.1 M MES/imidazole pH 6.5 (Morpheus E1). Cryo: Direct. Tray: 320511e1: pin: jjg2-4. |