7T8J
The ubiquitin-associated domain of human thirty-eight negative kinase-1 flexibly fused to the 1TEL crystallization chaperone via a GSGG linker
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-2 |
Synchrotron site | SSRL |
Beamline | BL9-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-06-29 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9795 |
Spacegroup name | P 65 |
Unit cell lengths | 68.651, 68.651, 56.735 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 34.330 - 1.890 |
R-factor | 0.2243 |
Rwork | 0.224 |
R-free | 0.23470 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7tcy |
RMSD bond length | 0.003 |
RMSD bond angle | 0.544 |
Data scaling software | autoPROC (20210420) |
Phasing software | PHASER (1.19.2_4158) |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 34.330 | 1.959 |
High resolution limit [Å] | 1.890 | 1.890 |
Rmerge | 0.065 | 1.631 |
Rmeas | 0.067 | 0.990 |
Rpim | 0.018 | 0.442 |
Number of reflections | 12236 | 1208 |
<I/σ(I)> | 20.93 | 2.59 |
Completeness [%] | 99.9 | 100 |
Redundancy | 14 | 14.6 |
CC(1/2) | 0.999 | 0.903 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 298 | 1.2 uL of 1 mg/mL protein in 50 mM Tris pH 8.8, 200 mM KCl combined with 1.2 uL of 100 mM Bis-tris-propane, 2.5 M Ammonium Nitrate |