7T1I
Crystal structure of CAB1 Pantothenate Kinase from Saccharomyces cerevisiae in complex with compound YU385597
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 1 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-12-10 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97857 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 87.969, 92.109, 99.099 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 65.870 - 2.400 |
R-factor | 0.1835 |
Rwork | 0.181 |
R-free | 0.23250 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6uj5 |
RMSD bond length | 0.007 |
RMSD bond angle | 1.544 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 99.100 | 2.490 |
High resolution limit [Å] | 2.400 | 2.400 |
Rmerge | 0.128 | 0.545 |
Rpim | 0.050 | 0.216 |
Number of reflections | 30602 | 2235 |
<I/σ(I)> | 10.1 | 3.7 |
Completeness [%] | 100.0 | 100 |
Redundancy | 6.8 | 7 |
CC(1/2) | 0.994 | 0.884 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 287 | 0.2 M Li Sulfate, 0.1 M Bis-Tris pH 5.5, 25% w/v PEG 3350 |