Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7T0F

Crystal structure of S25-39 Fab in complex with 4-MeO-KdoOAll

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSEALED TUBE
Source detailsRIGAKU MICROMAX-003
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2014-02-17
DetectorRIGAKU RAXIS IV++
Wavelength(s)1.5418
Spacegroup nameP 1 21 1
Unit cell lengths52.111, 63.624, 61.636
Unit cell angles90.00, 97.40, 90.00
Refinement procedure
Resolution50.000 - 2.000
R-factor0.2169
Rwork0.214
R-free0.26140
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3okd
RMSD bond length0.010
RMSD bond angle1.495
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0073)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.070
High resolution limit [Å]2.0004.3102.000
Rmerge0.0710.0460.398
Rmeas0.0830.0530.472
Rpim0.0420.0270.248
Total number of observations95425
Number of reflections2728427972600
<I/σ(I)>10.9
Completeness [%]99.198.795.1
Redundancy3.53.53
CC(1/2)0.9920.853
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP72890.1 M HEPES pH 7.0, 30% Jeffamine ED-2001, 5 mM 4-O-methyl-KdoOAll

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon