7SV3
Crystal structure of SpaA-SLH in complex with 4,6-Pyr-beta-D-ManNAc-(1->4)-beta-D-GlcNAcOMe
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-07-18 |
Detector | DECTRIS PILATUS 200K |
Wavelength(s) | 1.5418 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 34.652, 67.916, 72.905 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.900 - 1.700 |
R-factor | 0.1856 |
Rwork | 0.184 |
R-free | 0.21290 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6cwm |
RMSD bond length | 0.004 |
RMSD bond angle | 1.246 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 20.000 | 20.000 | 1.760 |
High resolution limit [Å] | 1.700 | 3.660 | 1.700 |
Rmerge | 0.145 | 0.097 | 0.773 |
Rmeas | 0.154 | 0.101 | 0.859 |
Rpim | 0.048 | 0.025 | 0.369 |
Total number of observations | 155592 | ||
Number of reflections | 19791 | 2136 | 1933 |
<I/σ(I)> | 11.8 | ||
Completeness [%] | 100.0 | 100 | 99.9 |
Redundancy | 7.9 | 14.9 | 5.2 |
CC(1/2) | 0.997 | 0.774 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.5 | 291.15 | 0.1 M sodium acetate trihydrate pH 4.5, 2.0 M ammonium sulphate |