7SPN
Crystal structure of IS11, a thermophilic esterase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-08-03 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97918 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 50.216, 103.359, 94.857 |
Unit cell angles | 90.00, 103.48, 90.00 |
Refinement procedure
Resolution | 45.090 - 2.920 |
R-factor | 0.2029 |
Rwork | 0.197 |
R-free | 0.25760 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | AlphaFold2-generated model |
RMSD bond length | 0.002 |
RMSD bond angle | 0.534 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.970 |
High resolution limit [Å] | 2.920 | 2.920 |
Rmerge | 0.115 | 0.831 |
Rpim | 0.069 | 0.528 |
Number of reflections | 20309 | 1004 |
<I/σ(I)> | 11.95 | 1.1 |
Completeness [%] | 98.4 | 97.6 |
Redundancy | 3.6 | 3.2 |
CC(1/2) | 0.998 | 0.572 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 3.5 | 298 | 0.1 M citric acid pH 3.5, 19% PEG3350, Cryoprotectant paratone |