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7SNN

Disulfide stabilized HIV-1 CA hexamer in complex with capsid inhibitor N-(1-(3-(4-chloro-1-methyl-3-(methylsulfonamido)-1H-indazol-7-yl)-4-oxo-3,4-dihydropyrido[2,3-d]pyrimidin-2-yl)-2-(3,5-difluorophenyl)ethyl)-2-(3-(difluoromethyl)-5,6-dihydrocyclopenta[c]pyrazol-1(4H)-yl)acetamide

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 4.2.2
Synchrotron siteALS
Beamline4.2.2
Temperature [K]100
Detector technologyCMOS
Collection date2021-07-02
DetectorRDI CMOS_8M
Wavelength(s)1.00
Spacegroup nameP 6
Unit cell lengths92.272, 92.272, 57.870
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution36.070 - 2.370
R-factor0.2125
Rwork0.211
R-free0.23320
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6vkv
RMSD bond length0.002
RMSD bond angle0.440
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwarePHASER
Refinement softwarePHENIX (1.18.2_3874)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.410
High resolution limit [Å]2.3702.370
Rmerge0.1750.411
Number of reflections11491544
<I/σ(I)>13.31.9
Completeness [%]99.795.8
Redundancy8.92.7
CC(1/2)0.797
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.5277.150.275M NaI, 7.5% peg 3350, 6% glycerol, 0.1M sodium cacodylate trihydrate pH 6.5

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