7SGW
Papain-Like Protease of SARS CoV-2 in complex with PLP_Snyder630 inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-BM |
Synchrotron site | APS |
Beamline | 19-BM |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-09-16 |
Detector | DECTRIS PILATUS3 X 6M |
Wavelength(s) | 0.9792 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 82.272, 82.272, 134.995 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 49.050 - 1.950 |
R-factor | 0.1779 |
Rwork | 0.176 |
R-free | 0.20680 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6wrh |
RMSD bond length | 0.009 |
RMSD bond angle | 1.545 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | HKL-3000 |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 49.050 | 49.050 | 1.980 |
High resolution limit [Å] | 1.950 | 5.290 | 1.950 |
Rmerge | 0.126 | 0.063 | 1.084 |
Rmeas | 0.132 | 0.067 | 1.207 |
Rpim | 0.041 | 0.021 | 0.512 |
Number of reflections | 39163 | 2133 | 1892 |
<I/σ(I)> | 10 | 1.09 | |
Completeness [%] | 99.8 | 99.8 | 97 |
Redundancy | 9.3 | 9.9 | 4.9 |
CC(1/2) | 0.996 | 0.998 | 0.590 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 277 | 0.1 M Bis_tris propane, pH 7.0, 2.5 M ammonium sulfate, 4 mM PLP_Snyder630 |