7SEZ
Crystal structure of Vaccinia Virus decapping enzyme D9 in complex with m7GDP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.3.1 |
Synchrotron site | ALS |
Beamline | 8.3.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-03-19 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.115869 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 52.550, 140.100, 75.980 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 51.502 - 1.700 |
R-factor | 0.195459436044 |
Rwork | 0.193 |
R-free | 0.22450 |
Structure solution method | SAD |
RMSD bond length | 0.008 |
RMSD bond angle | 1.218 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHENIX |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 51.502 | 1.761 |
High resolution limit [Å] | 1.700 | 1.700 |
Rmerge | 0.053 | |
Rmeas | 0.055 | |
Number of reflections | 31249 | 3061 |
<I/σ(I)> | 26.5 | |
Completeness [%] | 99.8 | |
Redundancy | 12.8 | |
CC(1/2) | 0.830 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | sodium citrate, PEG 3350, Bis Tris propane pH 7.5, MgCl2 |