7SEU
Crystal structure of E coli contaminant protein YncE co-purified with a plant protein
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-2 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-06-13 |
Detector | DECTRIS EIGER2 X 16M |
Wavelength(s) | 0.979 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 53.172, 147.270, 96.899 |
Unit cell angles | 90.00, 104.40, 90.00 |
Refinement procedure
Resolution | 48.610 - 2.500 |
R-factor | 0.237 |
Rwork | 0.236 |
R-free | 0.25590 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | AlphaFold AF-P76116-F1 |
Data reduction software | DIALS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.560 |
High resolution limit [Å] | 2.500 | 2.500 |
Number of reflections | 87600 | 3604 |
<I/σ(I)> | 7.3 | |
Completeness [%] | 95.9 | |
Redundancy | 2.8 | |
CC(1/2) | 0.981 | 0.973 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 277 | 0.2 M Li2SO4, 0.1 M MES, pH 6.0, and 20% PEG 4000 |