7SEA
Crystal structure of human Fibrillarin in complex with compound 2 from cocktail soak
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX1 |
Synchrotron site | Australian Synchrotron |
Beamline | MX1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-03-07 |
Detector | ADSC QUANTUM 210r |
Wavelength(s) | 0.9537 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 69.131, 138.651, 66.426 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.270 - 1.910 |
R-factor | 0.1984 |
Rwork | 0.196 |
R-free | 0.22890 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2ipx |
RMSD bond length | 0.011 |
RMSD bond angle | 1.076 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.1_4122) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.960 | 1.950 |
High resolution limit [Å] | 1.910 | 1.910 |
Rmerge | 0.059 | 0.833 |
Rmeas | 0.063 | 0.899 |
Rpim | 0.023 | 0.334 |
Number of reflections | 25161 | 1639 |
<I/σ(I)> | 17.4 | 2.3 |
Completeness [%] | 99.8 | |
Redundancy | 7.3 | |
CC(1/2) | 1.000 | 0.865 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 2.75-3.3 M Sodium Formate |