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7SDC

Structure of the SARS-CoV-2 main protease in complex with inhibitor MI-09

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]120
Detector technologyPIXEL
Collection date2021-04-24
DetectorBruker PHOTON II
Wavelength(s)1.54301
Spacegroup nameI 1 2 1
Unit cell lengths54.365, 80.987, 87.812
Unit cell angles90.00, 97.29, 90.00
Refinement procedure
Resolution24.350 - 1.850
R-factor0.2768
Rwork0.276
R-free0.30020
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7jpy
RMSD bond length0.010
RMSD bond angle1.501
Data reduction softwarePROTEUM PLUS
Data scaling softwareAimless
Phasing softwarePHENIX
Refinement softwarePHENIX (1.18.2_3874)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]24.3501.890
High resolution limit [Å]1.8501.850
Number of reflections317261902
<I/σ(I)>9.5
Completeness [%]98.4
Redundancy6.9
CC(1/2)0.9960.828
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2890.2 M Ammonium phosphate dibasic, 17% w/v PEG3350, pH8.0

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