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7SD9

Structure of the SARS-CoV-2 main protease in complex with inhibitor MPI48

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]120
Detector technologyPIXEL
Collection date2021-04-16
DetectorBruker PHOTON II
Wavelength(s)1.54301
Spacegroup nameI 1 2 1
Unit cell lengths51.661, 80.857, 89.697
Unit cell angles90.00, 96.66, 90.00
Refinement procedure
Resolution24.280 - 1.850
R-factor0.2236
Rwork0.222
R-free0.24940
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7jpy
RMSD bond length0.009
RMSD bond angle1.207
Data reduction softwarePROTEUM PLUS
Data scaling softwareAimless
Phasing softwarePHENIX
Refinement softwarePHENIX (1.18.2_3874)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]24.2801.890
High resolution limit [Å]1.8501.850
Number of reflections298511833
<I/σ(I)>13.3
Completeness [%]95.4
Redundancy4.6
CC(1/2)0.9960.920
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2890.2 M Ammonium phosphate dibasic, 17% w/v PEG3350, pH8.0

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