7SAK
Crystal Structure of LaM4 Nanobody bound to mCherry
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-07-29 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97918 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 156.554, 41.920, 47.827 |
Unit cell angles | 90.00, 94.37, 90.00 |
Refinement procedure
Resolution | 42.150 - 1.150 |
R-factor | 0.1186 |
Rwork | 0.117 |
R-free | 0.14390 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2h5q |
Data reduction software | DENZO (720) |
Data scaling software | SCALEPACK (720) |
Phasing software | PHASER (1.17) |
Refinement software | PHENIX (1.17) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 75.000 | 75.000 | 1.190 |
High resolution limit [Å] | 1.150 | 2.480 | 1.150 |
Rmerge | 0.082 | 0.061 | 0.417 |
Rmeas | 0.086 | 0.064 | 0.456 |
Rpim | 0.027 | 0.020 | 0.181 |
Number of reflections | 207109 | 11258 | 8475 |
<I/σ(I)> | 11.2 | ||
Completeness [%] | 97.0 | 99.9 | 77.3 |
Redundancy | 9.6 | 10.3 | 5.9 |
CC(1/2) | 0.998 | 0.910 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4 | 295 | 20 % PEG3350, 100 mM MMT (Malic Acid, MES and TRIS) |