7S96
Structure of the Light Harvesting Complex PC577 from Hemiselmis pacifica
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-06-24 |
Detector | DECTRIS PILATUS3 R 300K |
Wavelength(s) | 1.5418 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 41.381, 95.886, 125.003 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.710 - 1.800 |
R-factor | 0.1774 |
Rwork | 0.175 |
R-free | 0.21900 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4lm6 |
RMSD bond length | 0.005 |
RMSD bond angle | 0.764 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX (1.17_3644) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.000 | 30.000 | 1.830 |
High resolution limit [Å] | 1.800 | 4.880 | 1.800 |
Rmerge | 0.080 | 0.040 | 0.664 |
Rmeas | 0.092 | 0.043 | 0.809 |
Rpim | 0.044 | 0.016 | 0.455 |
Total number of observations | 184915 | ||
Number of reflections | 46623 | 2579 | 2170 |
<I/σ(I)> | 7.7 | ||
Completeness [%] | 98.9 | 99.9 | 94.3 |
Redundancy | 4 | 7 | 2.8 |
CC(1/2) | 0.999 | 0.686 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 25% 3350 PEG, 50 mM HEPES, 100 mM MgCl2 |