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7S94

Structure of the core postfusion porcine endogenous retrovirus fusion protein

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS-II BEAMLINE 17-ID-1
Synchrotron siteNSLS-II
Beamline17-ID-1
Temperature [K]100
Detector technologyPIXEL
Collection date2020-03-06
DetectorDECTRIS EIGER X 9M
Wavelength(s)0.9201
Spacegroup nameP 1 21 1
Unit cell lengths96.860, 34.219, 100.445
Unit cell angles90.00, 99.95, 90.00
Refinement procedure
Resolution47.700 - 2.000
R-factor0.1767
Rwork0.174
R-free0.21680
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4jgs
Data reduction softwareDIALS
Data scaling softwareAimless (0.7.3)
Phasing softwareMoRDa
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]47.73047.7302.050
High resolution limit [Å]2.0008.9302.000
Rmerge0.1620.1100.605
Rmeas0.1750.1170.688
Rpim0.0660.0410.316
Total number of observations41148291
Number of reflections419235661970
<I/σ(I)>7.311.23.1
Completeness [%]93.498.960.4
Redundancy6.67.34.2
CC(1/2)0.9840.9910.653
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP29324% (w/v) PEG 1500 and 20% (v/v) glycerol

222036

PDB entries from 2024-07-03

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