7S5B
Unbound State of a De novo designed Protein Binder to the Human Interleukin-7 Receptor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-02-26 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.033310 |
Spacegroup name | H 3 2 |
Unit cell lengths | 92.226, 92.226, 108.436 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 36.150 - 1.500 |
R-factor | 0.178 |
Rwork | 0.177 |
R-free | 0.19830 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | model |
RMSD bond length | 0.013 |
RMSD bond angle | 1.389 |
Data reduction software | XDS (20200131) |
Data scaling software | XDS (20200131) |
Phasing software | PHASER (2.8.3) |
Refinement software | PHENIX (1.18rc5_3822) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 36.150 | 1.554 |
High resolution limit [Å] | 1.500 | 1.501 |
Rmerge | 0.046 | 1.610 |
Rmeas | 0.049 | |
Rpim | 0.019 | 0.671 |
Number of reflections | 28231 | 2735 |
<I/σ(I)> | 16.19 | 1.37 |
Completeness [%] | 99.0 | 97.35 |
Redundancy | 6.7 | 6.5 |
CC(1/2) | 0.999 | 0.450 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 298 | 3.0 M sodium malonate pH 7.0 |