7S54
Sortase A from Streptococcus agalactiae with the deltaN188 b7-b8 loop sequence from Staphylococcus aureus Sortase A
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.1 |
Synchrotron site | ALS |
Beamline | 5.0.1 |
Temperature [K] | 80 |
Detector technology | PIXEL |
Collection date | 2021-04-14 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.977410 |
Spacegroup name | I 1 2 1 |
Unit cell lengths | 71.297, 33.520, 115.599 |
Unit cell angles | 90.00, 91.80, 90.00 |
Refinement procedure
Resolution | 35.631 - 1.794 |
R-factor | 0.1877 |
Rwork | 0.184 |
R-free | 0.24910 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3rcc |
RMSD bond length | 0.007 |
RMSD bond angle | 0.943 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHENIX |
Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 35.631 | 10.000 | 1.830 |
High resolution limit [Å] | 1.790 | 8.000 | 1.790 |
Rmerge | 0.148 | 0.066 | 1.623 |
Rmeas | 0.160 | 0.071 | 1.000 |
Rpim | 0.062 | 0.027 | 0.712 |
Number of reflections | 25832 | 237 | 1292 |
<I/σ(I)> | 8.4 | ||
Completeness [%] | 99.0 | 99 | 83.2 |
Redundancy | 6.6 | 6.5 | 5.9 |
CC(1/2) | 0.996 | 0.998 | 0.665 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 298 | 0.02 MES monohydrate pH 6, 12% (v/v) 2-Propanol, 24% (w/v) PEG monomethyl ether 2000 |