7S1P
PRMT5/MEP50 crystal structure with sinefungin bound
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-10-29 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.979 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 96.755, 137.730, 178.249 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.460 - 2.210 |
R-factor | 0.2111 |
Rwork | 0.209 |
R-free | 0.24980 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7s0u |
RMSD bond length | 0.002 |
RMSD bond angle | 0.467 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.1_4122) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 59.160 | 2.400 |
High resolution limit [Å] | 2.200 | 2.200 |
Number of reflections | 41740 | 444 |
<I/σ(I)> | 9.5 | 0.9 |
Completeness [%] | 69.5 | |
Redundancy | 2.1 | |
CC(1/2) | 0.990 | 0.530 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 281 | 100 mM Sodium Citrate pH 5.4, 15% PEG 3350, 4% Tacsimate pH 5 |