7S1D
Crystal structure of E.coli DsbA in complex with compound MIPS-0001877 (compound 39)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX1 |
Synchrotron site | Australian Synchrotron |
Beamline | MX1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-12-02 |
Detector | ADSC QUANTUM 210r |
Wavelength(s) | 0.953690 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 115.966, 64.220, 74.356 |
Unit cell angles | 90.00, 126.04, 90.00 |
Refinement procedure
Resolution | 33.032 - 1.590 |
R-factor | 0.1598 |
Rwork | 0.158 |
R-free | 0.19420 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | DsbA wt |
RMSD bond length | 0.011 |
RMSD bond angle | 1.247 |
Data scaling software | SCALA (3.3.9) |
Phasing software | PHASER (2.1.4) |
Refinement software | PHENIX (dev_1760) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 56.423 | 56.423 | 1.680 |
High resolution limit [Å] | 1.590 | 5.030 | 1.590 |
Rmerge | 0.022 | 0.402 | |
Rmeas | 0.044 | ||
Rpim | 0.022 | 0.013 | 0.232 |
Total number of observations | 232207 | ||
Number of reflections | 58965 | 1920 | 8519 |
<I/σ(I)> | 20 | 25.6 | 2 |
Completeness [%] | 99.3 | 98.2 | 98.9 |
Redundancy | 3.9 | 3.7 | 4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.2 | 293 | 11-13% PEG 8000, 5-7.5% glycerol, 1 mM CuCl2, 100 mM sodium cacodylate |