7RZD
CRYSTAL STRUCTURE OF HLA-B*07:02 IN COMPLEX WITH MLL(747-755) PEPTIDE
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-2 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-10-12 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97932 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 65.897, 65.897, 238.899 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.470 - 1.820 |
R-factor | 0.1812 |
Rwork | 0.179 |
R-free | 0.23590 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5wmn |
RMSD bond length | 0.007 |
RMSD bond angle | 1.454 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 29.490 | 1.860 |
High resolution limit [Å] | 1.820 | 1.820 |
Rmerge | 0.068 | 0.823 |
Number of reflections | 48758 | 2890 |
<I/σ(I)> | 22.8 | 3.8 |
Completeness [%] | 99.9 | 98.5 |
Redundancy | 14.6 | 14.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 291 | 18-24%PEG4000, 0.1M SODIUM CITRATE, 20% ISOPROPANOL, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K |