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7RVL

Segment from the Y169F mutant of the human prion protein 168-176 EFSNQNNFV

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeELECTRON MICROSCOPE
Source detailsOTHER
Temperature [K]100
Detector technologyCMOS
Collection date2017-04-25
DetectorTVIPS TEMCAM-F416
Wavelength(s)0.0251
Spacegroup nameP 1
Unit cell lengths4.900, 10.380, 30.260
Unit cell angles90.91, 90.82, 102.25
Refinement procedure
Resolution10.140 - 1.000
R-factor0.1915
Rwork0.190
R-free0.21060
Structure solution methodAB INITIO PHASING
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareSHELXD
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]10.14010.1401.030
High resolution limit [Å]1.0004.4701.000
Rmerge0.1780.0970.363
Rmeas0.1970.1070.400
Total number of observations14661
Number of reflections273729163
<I/σ(I)>5.9910.183.66
Completeness [%]87.180.669.7
Redundancy5.3575.5175.006
CC(1/2)0.9850.9860.940
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP4.52980.1 M sodium acetate, pH 4.5, 1 M sodium chloride, 0.1 M lithium sulfate

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PDB entries from 2024-07-10

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