7RVF
Segment from the Y169F mutant of the bank vole prion protein 168-176 QFNNQNNFV
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ELECTRON MICROSCOPE |
Source details | OTHER |
Temperature [K] | 100 |
Detector technology | CMOS |
Collection date | 2017-03-22 |
Detector | TVIPS TEMCAM-F416 |
Wavelength(s) | 0.0251 |
Spacegroup name | P 1 |
Unit cell lengths | 4.880, 10.560, 29.980 |
Unit cell angles | 93.89, 92.38, 103.29 |
Refinement procedure
Resolution | 10.240 - 1.000 |
R-factor | 0.2202 |
Rwork | 0.217 |
R-free | 0.25060 |
Structure solution method | AB INITIO PHASING |
RMSD bond length | 0.008 |
RMSD bond angle | 1.662 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | SHELXD |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 10.240 | 10.240 | 1.030 |
High resolution limit [Å] | 1.000 | 4.490 | 1.000 |
Rmerge | 0.229 | 0.142 | 0.636 |
Rmeas | 0.248 | 0.151 | 0.700 |
Total number of observations | 18329 | ||
Number of reflections | 2938 | 29 | 123 |
<I/σ(I)> | 5.33 | 10.28 | 2.28 |
Completeness [%] | 94.8 | 87.9 | 54.9 |
Redundancy | 6.239 | 6.483 | 5.154 |
CC(1/2) | 0.980 | 0.988 | 0.711 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 298 | 0.2 M MES, pH 6, 10% MPD |