7RV9
Crystal structure of the BCL6 BTB domain in complex with OICR-10269
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-08-02 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.00 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 31.215, 72.787, 54.995 |
Unit cell angles | 90.00, 105.72, 90.00 |
Refinement procedure
Resolution | 30.010 - 1.500 |
R-factor | 0.148 |
Rwork | 0.146 |
R-free | 0.17800 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1r29 |
RMSD bond length | 0.022 |
RMSD bond angle | 2.497 |
Data reduction software | XDS |
Data scaling software | Aimless (0.3.8) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 52.940 | 1.505 |
High resolution limit [Å] | 1.500 | 1.500 |
Rmerge | 0.046 | 0.648 |
Rmeas | 0.600 | |
Rpim | 0.525 | |
Number of reflections | 18489 | 193 |
<I/σ(I)> | 13.5 | 2 |
Completeness [%] | 97.7 | 96.5 |
Redundancy | 3.4 | 3.3 |
CC(1/2) | 0.726 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICROBATCH | 4.6 | 292 | Microseeding with10% PEG6K with 0.1M MES pH 4.6, 100 mM AmSO4, 10% glycerol, 10% DMSO in Reservoir. Shifted to pH 7.4, 20% glycerol for freezing |