7RRM
Structure of the human TMED1 (p24gamma1) Golgi dynamics Domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 1 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-02-10 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9786 |
Spacegroup name | P 6 2 2 |
Unit cell lengths | 151.890, 151.890, 56.170 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 45.160 - 1.720 |
R-factor | 0.1957 |
Rwork | 0.194 |
R-free | 0.22160 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5gu5 |
RMSD bond length | 0.007 |
RMSD bond angle | 1.411 |
Data reduction software | XDS (APP3) |
Data scaling software | XDS |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.160 | 1.820 |
High resolution limit [Å] | 1.720 | 1.720 |
Number of reflections | 41068 | 6485 |
<I/σ(I)> | 19.76 | 0.98 |
Completeness [%] | 99.9 | 99.5 |
Redundancy | 39.64 | 39.69 |
CC(1/2) | 1.000 | 0.490 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.6 | 294 | 0.1 M sodium acetate trihydrate pH 4.6, 8% (w/v) PEG 4,000 |