7RHN
Co-crystal structure of Q67H mutant of disulfide stabilized HIV-1 CA hexamer and lenacapavir
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 4.2.2 |
Synchrotron site | ALS |
Beamline | 4.2.2 |
Temperature [K] | 100 |
Detector technology | CMOS |
Collection date | 2020-12-20 |
Detector | RDI CMOS_8M |
Wavelength(s) | 1.00003 |
Spacegroup name | P 6 |
Unit cell lengths | 89.730, 89.730, 56.092 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 45.480 - 2.460 |
R-factor | 0.2439 |
Rwork | 0.242 |
R-free | 0.28840 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6vkv |
RMSD bond length | 0.003 |
RMSD bond angle | 0.690 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.480 | 2.560 |
High resolution limit [Å] | 2.460 | 2.460 |
Rmerge | 0.200 | 1.400 |
Number of reflections | 9492 | 1063 |
<I/σ(I)> | 12.6 | 1.6 |
Completeness [%] | 100.0 | |
Redundancy | 11.2 | |
CC(1/2) | 0.997 | 0.751 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 277.15 | 0.35M NaI, 4% peg 3350, 6% glycerol, 0.1M sodium cacodylate trihydrate pH 6.5 |