7RE8
Class I MHC (HLA-A*02) presenting alpha fetoprotein peptide (AFP)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-02-23 |
Detector | DECTRIS EIGER2 X 16M |
Wavelength(s) | 0.97918 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 63.207, 87.310, 78.724 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 58.470 - 2.820 |
R-factor | 0.191 |
Rwork | 0.185 |
R-free | 0.23900 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5e00 |
Data reduction software | DIALS |
Data scaling software | DIALS |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 58.480 | 2.870 |
High resolution limit [Å] | 2.820 | 2.820 |
Number of reflections | 20564 | 1016 |
<I/σ(I)> | 8.4 | |
Completeness [%] | 99.0 | |
Redundancy | 6.5 | |
CC(1/2) | 0.991 | 0.918 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 277.15 | 25 mM MES pH6.5, 150 mM NaCl, 25% v/v PEG 3350 |