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7RBX

Crystal structure of isocitrate lyase and phosphorylmutase:isocitrate lyase from Brucella melitensis biovar Abortus 2308 bound to itaconic acid

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-F
Synchrotron siteAPS
Beamline21-ID-F
Temperature [K]100
Detector technologyCCD
Collection date2021-06-10
DetectorRAYONIX MX-300
Wavelength(s)0.97872
Spacegroup nameP 21 21 21
Unit cell lengths76.750, 136.270, 181.980
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution47.590 - 1.800
R-factor0.143
Rwork0.143
R-free0.16630
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3eol
RMSD bond length0.006
RMSD bond angle0.781
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareMOLREP
Refinement softwarePHENIX (dev-4274)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]47.59047.5901.850
High resolution limit [Å]1.8008.0501.800
Rmerge0.0720.0400.539
Rmeas0.0780.0430.581
Total number of observations1200309
Number of reflections175674217112899
<I/σ(I)>14.8333.243.36
Completeness [%]99.498.599.6
Redundancy6.8336.5657.05
CC(1/2)0.9980.9980.923
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.5287BrabA.00014.a.A1.PW38950 at 25.5 mg/mL with 2.5 mM itaconic acid and 2.5 mM MgCl2 against MCSG1 screen condition G8: 0.2 M ammonium sulfate, 0.1 M Tris pH 8.5, 25% PEG 3350 supplemented with 20% ethylene glycol as cryo-protectant; crystal tracking ID 321126g8, unique puck ID qrt6-6

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