7R8I
Crystal structure of Pseudooceanicola lipolyticus Argonaute bound to 5' OH guide DNA in the presence of Mg2+
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CHESS BEAMLINE F1 |
Synchrotron site | CHESS |
Beamline | F1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-03-18 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.0 |
Spacegroup name | I 2 3 |
Unit cell lengths | 200.019, 200.019, 200.019 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.730 - 2.400 |
R-factor | 0.2145 |
Rwork | 0.213 |
R-free | 0.24810 |
Structure solution method | SAD |
RMSD bond length | 0.009 |
RMSD bond angle | 1.089 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.19.1_4122) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.440 |
High resolution limit [Å] | 2.400 | 2.400 |
Rpim | 0.034 | 0.691 |
Number of reflections | 52049 | 2601 |
<I/σ(I)> | 30 | 1.46 |
Completeness [%] | 100.0 | 100 |
Redundancy | 9.2 | 9.2 |
CC(1/2) | 0.996 | 0.472 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 300 | 100 mM Tris-HCl pH 8.0, 8% PEG 8000 |