7R8H
Crystal structure of Pseudooceanicola lipolyticus Argonaute bound to 5' p guide DNA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CHESS BEAMLINE F1 |
Synchrotron site | CHESS |
Beamline | F1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-03-18 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.0 |
Spacegroup name | I 2 3 |
Unit cell lengths | 199.823, 199.823, 199.823 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.680 - 2.540 |
R-factor | 0.202 |
Rwork | 0.200 |
R-free | 0.23860 |
Structure solution method | SAD |
RMSD bond length | 0.009 |
RMSD bond angle | 1.096 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.590 |
High resolution limit [Å] | 2.540 | 2.550 |
Rpim | 0.027 | |
Number of reflections | 43544 | 2179 |
<I/σ(I)> | 28.8 | 1 |
Completeness [%] | 100.0 | 100 |
Redundancy | 19.9 | |
CC(1/2) | 1.000 | 0.320 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 300 | 100 mM Tris-HCl, pH 8.0, 8% PEG 8,000 |