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7R66

Structure of Pfp1 protease from Thermococcus thioreducens: large unit cell at 1.44 A resolution

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 8.3.1
Synchrotron siteALS
Beamline8.3.1
Temperature [K]173
Detector technologyPIXEL
Collection date2019-06-15
DetectorDECTRIS EIGER X 500K
Wavelength(s)1.1158
Spacegroup nameH 3
Unit cell lengths151.030, 151.030, 80.716
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution68.690 - 1.440
R-factor0.1355
Rwork0.134
R-free0.16590
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5txw
RMSD bond length0.011
RMSD bond angle1.174
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.19_4092)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]75.0001.400
High resolution limit [Å]1.3801.380
Rmerge0.216
Rmeas0.221
Rpim0.440
Number of reflections1412307080
<I/σ(I)>11.90.3
Completeness [%]100.0100
Redundancy4719.8
CC(1/2)0.9990.073
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.5298Sitting drop crystallization using Cryschem plates. Drops were equal amounts of a 25 mg / ml protein stock solution in water and the reservoir solution. The reservoir was 1.4 M sodium citrate at pH 6.5. Crystallization was at room temperature. Drops were 10 ul total starting volume, reservoirs 0.6 ml.

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