7QZ7
Transcriptional regulator LmrR with bound daunomycin and with Trp-67 and Trp-96 replaced by 5,6,7-trifluoroTrp
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-09-15 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.91165 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 102.495, 35.091, 68.074 |
Unit cell angles | 90.00, 98.01, 90.00 |
Refinement procedure
Resolution | 33.710 - 2.300 |
R-factor | 0.2285 |
Rwork | 0.225 |
R-free | 0.29040 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3f8b |
Data scaling software | Aimless (0.7.7) |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 33.710 | 33.710 | 2.380 |
High resolution limit [Å] | 2.300 | 8.910 | 2.300 |
Rmerge | 0.048 | 0.032 | 0.865 |
Rmeas | 0.059 | 0.039 | 1.056 |
Rpim | 0.034 | 0.022 | 0.599 |
Total number of observations | 30722 | 531 | 3167 |
Number of reflections | 10772 | 204 | 1072 |
<I/σ(I)> | 9.1 | 26 | 1.1 |
Completeness [%] | 98.6 | 96.4 | 98.9 |
Redundancy | 2.9 | 2.6 | 3 |
CC(1/2) | 0.998 | 0.997 | 0.509 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.1 | 293 | Protein solution: 6 mg/ml in 20 mM Tris-HCl, pH 8.0, 300 mM NaCl. Reservoir solution: 100 mM SPG buffer, pH 6.1, 25% PEG 1500 |