7QXC
Recognition of Staphylococcus aureus wall teichoic acid analogue SA533 (compound 1) by Fab4461
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALBA BEAMLINE XALOC |
Synchrotron site | ALBA |
Beamline | XALOC |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-12-01 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97926 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 58.191, 65.448, 74.338 |
Unit cell angles | 90.00, 112.90, 90.00 |
Refinement procedure
Resolution | 53.510 - 1.452 |
Rwork | 0.174 |
R-free | 0.19990 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | separate constant and variable domains of PDB entry 5I1D |
RMSD bond length | 0.009 |
RMSD bond angle | 1.498 |
Data reduction software | XDS (January 2020) |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER (2.8.3) |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 53.510 | 1.530 |
High resolution limit [Å] | 1.450 | 1.450 |
Rmerge | 0.028 | 0.430 |
Rmeas | 0.039 | 0.593 |
Rpim | 0.027 | 0.406 |
Number of reflections | 87656 | 10648 |
<I/σ(I)> | 16.4 | 1.5 |
Completeness [%] | 96.6 | 80.6 |
Redundancy | 3.1 | 2.5 |
CC(1/2) | 0.997 | 0.608 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 9.5 | 294 | 10 mM Tris-HCl; 250 mM sodium chloride; 12.9 % w/v polyethylene glycol 20,000; 150 mM CAPSO pH 9.5; 6 % v/v polyethylene glycol 300 |