Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7QVB

Crystal structure of the DNA-binding protein DdrC from Deinococcus radiodurans

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE MASSIF-1
Synchrotron siteESRF
BeamlineMASSIF-1
Temperature [K]100
Detector technologyPIXEL
Collection date2018-07-14
DetectorDECTRIS PILATUS3 2M
Wavelength(s)0.9660
Spacegroup nameP 32 2 1
Unit cell lengths111.721, 111.721, 105.187
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution46.251 - 2.500
Rwork0.183
R-free0.24650
Structure solution methodSAD
RMSD bond length0.003
RMSD bond angle1.233
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER (2.8.3)
Refinement softwareREFMAC (5.8.0267)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]49.3402.600
High resolution limit [Å]2.5002.500
Rmerge0.0842.012
Rmeas0.0992.368
Rpim0.0511.219
Number of reflections266532978
<I/σ(I)>12.61.1
Completeness [%]99.999.8
Redundancy6.46.4
CC(1/2)0.9990.479
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP82930.1 M Tris pH8.0, 1.2 M ammonium sulfate

224931

PDB entries from 2024-09-11

PDB statisticsPDBj update infoContact PDBjnumon