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7QTA

S1 nuclease from Aspergillus oryzae in complex with uridine

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, EMBL c/o DESY BEAMLINE P13 (MX1)
Synchrotron sitePETRA III, EMBL c/o DESY
BeamlineP13 (MX1)
Temperature [K]100
Detector technologyPIXEL
Collection date2016-10-18
DetectorDECTRIS PILATUS 6M
Wavelength(s)1.0332
Spacegroup nameP 1
Unit cell lengths43.040, 48.186, 65.232
Unit cell angles107.18, 90.11, 105.62
Refinement procedure
Resolution44.200 - 1.060
R-factor0.1205
Rwork0.118
R-free0.14680
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5fb9
RMSD bond length0.011
RMSD bond angle1.658
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0267)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]44.2001.088
High resolution limit [Å]1.0601.060
Rmeas0.0851.145
Number of reflections18761010422
<I/σ(I)>81.2
Completeness [%]86.064.47
Redundancy3.63.4
CC(1/2)0.9970.373
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.52910.2 M Sodium chloride, 0.05 M Calcium chloride, 0.1 M BIS-TRIS pH 5.5, 25% w/v Polyethylene glycol 3,350, protein concentration 10 mg/ml

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