7QRV
Crystal structure of NHL domain of TRIM2 (full C-terminal)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-09-27 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.00004 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 68.669, 89.242, 86.725 |
Unit cell angles | 90.00, 106.99, 90.00 |
Refinement procedure
Resolution | 45.470 - 1.450 |
R-factor | 0.1531 |
Rwork | 0.152 |
R-free | 0.17790 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7b2r |
RMSD bond length | 0.016 |
RMSD bond angle | 1.636 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 45.470 | 45.430 | 1.490 |
High resolution limit [Å] | 1.450 | 6.480 | 1.450 |
Rmerge | 0.059 | 0.043 | 0.411 |
Rmeas | 0.069 | 0.046 | 0.488 |
Rpim | 0.026 | 0.017 | 0.186 |
Number of reflections | 175817 | 2065 | 12684 |
<I/σ(I)> | 16.8 | 3.8 | |
Completeness [%] | 99.5 | 99.7 | 97.4 |
Redundancy | 6.8 | 6.9 | 6.7 |
CC(1/2) | 0.999 | 0.998 | 0.922 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293.15 | 30% w/v PEG 5000 MME, 0.2 M Ammonium sulfate, 0.1M MES, pH 6.5 |