7QRS
Structural insight into the Scribble PDZ domains interaction with the oncogenic Human T-cell lymphotrophic virus-1 (HTLV-1) Tax1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-02-01 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9537 |
Spacegroup name | P 65 |
Unit cell lengths | 50.257, 50.257, 184.398 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 28.140 - 1.770 |
R-factor | 0.2426 |
Rwork | 0.241 |
R-free | 0.27550 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5vwc |
RMSD bond length | 0.009 |
RMSD bond angle | 0.975 |
Data reduction software | DIALS |
Data scaling software | Aimless |
Phasing software | PHASER (1.15.2-3472-000) |
Refinement software | PHENIX (1.15.2_3472) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.100 | 1.800 |
High resolution limit [Å] | 1.770 | 1.770 |
Rmerge | 0.056 | 0.760 |
Number of reflections | 25599 | 2557 |
<I/σ(I)> | 16.48 | |
Completeness [%] | 99.3 | |
Redundancy | 2.7 | |
CC(1/2) | 0.990 | 0.430 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293.15 | 0.1M Zinc chloride, 0.1M Sodium acetate ph5, 20% w/v PEG 1500 |