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7QQJ

Sucrose phosphorylase from Jeotgalibaca ciconiae

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE MASSIF-1
Synchrotron siteESRF
BeamlineMASSIF-1
Temperature [K]100
Detector technologyPIXEL
Collection date2021-06-06
DetectorDECTRIS PILATUS3 2M
Wavelength(s)0.96546
Spacegroup nameP 1 21 1
Unit cell lengths51.639, 90.828, 96.170
Unit cell angles90.00, 92.83, 90.00
Refinement procedure
Resolution48.000 - 2.050
Rwork0.196
R-free0.25440
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7qqi
RMSD bond length0.009
RMSD bond angle1.571
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0267)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]48.00048.0002.110
High resolution limit [Å]2.0508.9402.050
Rmerge0.1230.0460.908
Rmeas0.1720.0641.269
Rpim0.1210.0460.885
Number of reflections549736514272
<I/σ(I)>5.9
Completeness [%]98.8
Redundancy332.8
CC(1/2)0.9870.9940.336
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.5291Protein was concentrated to 16 mg/ml in 25 mM Tris, pH 7.8, 100 mM NaCl. Drops were prepared by mixing protein and reservoir solution at a 1:1 volume ratio. Composition reservoir solution: 25% PEG 3350, 0.1 M Bis-tris propane, pH 6.5, 50 mM Na/K phosphate

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PDB entries from 2024-07-10

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