7QOQ
Crystal structure of Mycobacterium hassiacum glucosyl-3-phosphoglycerate synthase at pH 8.5 in complex with UMP and Magnesium
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-2 |
Synchrotron site | ESRF |
Beamline | ID23-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-02-14 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.87261 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 71.076, 90.377, 96.007 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.000 - 1.930 |
R-factor | 0.1782 |
Rwork | 0.176 |
R-free | 0.22760 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7pvl |
RMSD bond length | 0.007 |
RMSD bond angle | 0.794 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.290 | 2.030 |
High resolution limit [Å] | 1.930 | 1.930 |
Rmerge | 0.195 | 1.106 |
Rmeas | 0.217 | 1.251 |
Rpim | 0.094 | 0.573 |
Number of reflections | 46655 | 5966 |
<I/σ(I)> | 7.9 | 0.441 |
Completeness [%] | 98.1 | 87.3 |
Redundancy | 5.1 | 4.3 |
CC(1/2) | 0.989 | 0.441 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 298 | 0.1 M Tris pH 8.5; 0.2 M MgCl2; 25% PEG 3350 |