7QJJ
X-Ray Structure of a Mn2+ soak of EleNRMT in complex with two Nanobodies at 4.6A
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 80 |
Detector technology | PIXEL |
Collection date | 2021-03-27 |
Detector | DECTRIS PILATUS 2M-F |
Wavelength(s) | 1.892738 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 92.900, 115.930, 148.660 |
Unit cell angles | 90.00, 107.59, 90.00 |
Refinement procedure
Resolution | 12.000 - 4.600 |
R-factor | 0.2863 |
Rwork | 0.284 |
R-free | 0.32740 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PDBID 7QIA |
RMSD bond length | 0.003 |
RMSD bond angle | 0.604 |
Data reduction software | XDS (Version Feb5, 2021) |
Data scaling software | XSCALE (Version Feb5, 2021) |
Phasing software | PHENIX (1.20_4459) |
Refinement software | PHENIX (1.20_4459) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 12.000 | 4.700 |
High resolution limit [Å] | 4.600 | 4.600 |
Rmeas | 0.144 | 1.474 |
Number of reflections | 32816 | 2039 |
<I/σ(I)> | 11.42 | 1.85 |
Completeness [%] | 99.7 | |
Redundancy | 14 | |
CC(1/2) | 1.000 | 0.910 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 277.17 | 50 mM MgAc, 50 mM HEPES pH 7.2-7.6 and 25-30% PEG400 and crystals soaked in 25mM MnAc |