7QHY
Structure of a Kluyveromyces lactis protein involved in RNA decay
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 2 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-06-16 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.97856 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 76.820, 76.820, 174.310 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 43.760 - 2.450 |
R-factor | 0.2314 |
Rwork | 0.230 |
R-free | 0.26870 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | AlphaFold model |
RMSD bond length | 0.008 |
RMSD bond angle | 0.970 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | BUSTER (2.10.3) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 43.770 | 2.510 |
High resolution limit [Å] | 2.450 | 2.450 |
Rmerge | 0.011 | 3.897 |
Number of reflections | 22619 | 1648 |
<I/σ(I)> | 30.8 | 1.1 |
Completeness [%] | 99.8 | 100 |
Redundancy | 59.8 | |
CC(1/2) | 0.999 | 0.605 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 280 | 0.1 M sodium citrate pH 5.6, 0.9-1 M Li2SO4 and 0.6 M ammonium sulfate |