7QFK
Crystal structure of S-layer protein SlpX from Lactobacillus acidophilus, domain II, Co-Crystallization with HgCl2, Mutation Ser316Cys (aa 194-362)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE MASSIF-1 |
Synchrotron site | ESRF |
Beamline | MASSIF-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-04-17 |
Detector | DECTRIS PILATUS3 2M |
Wavelength(s) | 0.96546 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 63.166, 98.875, 155.130 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.980 - 2.480 |
R-factor | 0.20312 |
Rwork | 0.202 |
R-free | 0.23097 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | MR model calculated with RoseTTAFold |
RMSD bond length | 0.013 |
RMSD bond angle | 1.547 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.980 | 2.573 |
High resolution limit [Å] | 2.480 | 2.484 |
Number of reflections | 34927 | 3313 |
<I/σ(I)> | 12.75 | |
Completeness [%] | 99.5 | |
Redundancy | 12.4 | |
CC(1/2) | 0.998 | 0.836 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293.15 | Protein stock solution of 10 mg/mL in 20 mM Hepes pH 8 and 100 mM NaCl; Index screen condition H12 (0.15 M Potassium bromide, 30% w/v Polyethylene glycol monomethyl ether 2,000) with protein end concentration of 5 mg/mL corresponding to 50% of protein solution in the 1.0 uL drop |