7QCS
PALS1/MPP5 PDZ domain in complex with SARS-CoV-2_E PBM peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 2 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-03-12 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.987 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 88.750, 131.550, 70.930 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.380 - 2.804 |
R-factor | 0.2653 |
Rwork | 0.263 |
R-free | 0.30490 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4uu5 |
RMSD bond length | 0.009 |
RMSD bond angle | 1.130 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | BUSTER (2.10.3) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 44.380 | 2.904 |
High resolution limit [Å] | 2.804 | 2.804 |
Rmerge | 0.124 | |
Number of reflections | 8040 | 799 |
<I/σ(I)> | 9.33 | |
Completeness [%] | 75.8 | |
Redundancy | 5.6 | |
CC(1/2) | 0.999 | 0.689 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 277.15 | 0.5 M LiCl, 1.6 M (NH4)2SO4 |